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Peptide record

TPDB50564

Antifungal standard
53 amino acids
Basic Information
3D PDB MODEL
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TPDB50564
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 53-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
SMVAEARTCESQSHKFKGPCASDHNCASVCQTERFSGGHCRGFRRRCFCTTHC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C239H374N84O75S9
ILWY
C
5912.66
8.32
12
4
11
+4
2.89
-0.645
18.49
Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour
500
0.08
21
Residue Composition
number
4
A
6
R
1
N
1
D
8
C
3
E
2
Q
4
G
4
H
0
I
0
L
2
K
1
M
4
F
1
P
6
S
4
T
0
W
0
Y
2
V
Amino Acid Distribution
A: 4 R: 6 N: 1 D: 1 C: 8 E: 3 Q: 2 G: 4 H: 4 I: 0 L: 0 K: 2 M: 1 F: 4 P: 1 S: 6 T: 4 W: 0 Y: 0 V: 2
Chemical Descriptors
53 reviewed residue count
C239H374N84O75S9 sequence-only estimate (linear, free termini)
5912.66 sequence-only estimate (linear, free termini)
8.32 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
2.89 sequence-only estimate (linear, free termini)
-0.645 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA