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Peptide record

TPDB50545

Antifungal standard
45 amino acids
Basic Information
3D PDB MODEL
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TPDB50545
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 45-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
RTCENLARKYRGPCFSGCDTHCTTKENAVSGRCRDDFRCWCTKRC
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C212H338N74O66S8
QIM
C
5235.95
8.52
11
5
8
+5
3.66
-0.973
19.56
Mammalian: 1 hour Yeast: 2 min E.coli: 2 min
7490
1.43
18
Residue Composition
number
2
A
7
R
2
N
3
D
8
C
2
E
0
Q
3
G
1
H
0
I
1
L
3
K
0
M
2
F
1
P
2
S
5
T
1
W
1
Y
1
V
Amino Acid Distribution
A: 2 R: 7 N: 2 D: 3 C: 8 E: 2 Q: 0 G: 3 H: 1 I: 0 L: 1 K: 3 M: 0 F: 2 P: 1 S: 2 T: 5 W: 1 Y: 1 V: 1
Chemical Descriptors
45 reviewed residue count
C212H338N74O66S8 sequence-only estimate (linear, free termini)
5235.95 sequence-only estimate (linear, free termini)
8.52 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
3.66 sequence-only estimate (linear, free termini)
-0.973 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA