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Peptide record

TPDB50521

Antifungal standard
65 amino acids
Basic Information
3D PDB MODEL
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TPDB50521
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 65-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
PKMKTHRGSAKRFKKTASGKLKRGHAYTSHLFANKTKKQKRHLRKATLVSPGDFKRIRQMLDNLK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C334H566N112O84S2
CEW
K
7558.99
12.33
25
2
19
+19
3.14
-1.231
54.15
Mammalian: >20 hour Yeast: >20 hour E.coli: ?
1490
0.20
14
Residue Composition
number
5
A
7
R
2
N
2
D
0
C
0
E
2
Q
4
G
4
H
1
I
6
L
14
K
2
M
3
F
2
P
4
S
5
T
0
W
1
Y
1
V
Amino Acid Distribution
A: 5 R: 7 N: 2 D: 2 C: 0 E: 0 Q: 2 G: 4 H: 4 I: 1 L: 6 K: 14 M: 2 F: 3 P: 2 S: 4 T: 5 W: 0 Y: 1 V: 1
Chemical Descriptors
65 reviewed residue count
C334H566N112O84S2 sequence-only estimate (linear, free termini)
7558.99 sequence-only estimate (linear, free termini)
12.33 sequence-only estimate (linear, free termini)
+19 sequence-only estimate (linear, free termini)
3.14 sequence-only estimate (linear, free termini)
-1.231 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA