TPDB

3D PDB MODEL

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TPDB ID TPDB50476

Activity

Antifungal

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 91-aa standard natural antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTGTGRTRHLRDVNARFRNGFRGTTPKPRAQPTN

FASTA

>TPDB50476|Antifungal|length=91
MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTGTGRTRHLRDVNARFRNGFRGTTPKPRAQPTN

Formula C444H731N159O122S5

Absent Amino Acids E

Common Amino Acids R

Mass 10408.98

PI 12.10

Basic Residues 29

Acidic Residues 2

Hydrophobic Residues 20

Net Charge +23

Boman Index 24.28

Hydrophobicity -1.295

Aliphatic Index 30.11

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 8730

Absorbance 280nm 83.87

Polar Residues 30

number

6

A

13

R

4

N

2

D

4

C

0

E

4

Q

9

G

4

H

2

I

2

L

12

K

1

M

4

F

3

P

5

S

11

T

1

W

2

Y

2

V

Amino Acid Distribution

A: 6 R: 13 N: 4 D: 2 C: 4 E: 0 Q: 4 G: 9 H: 4 I: 2 L: 2 K: 12 M: 1 F: 4 P: 3 S: 5 T: 11 W: 1 Y: 2 V: 2

Length

91

Formula

C444H731N159O122S5

Mass

10408.98

PI

12.10

Net Charge

+23

Boman Index

24.28

Hydrophobicity

-1.295

Evidence 1 Activity

Source & Reference

Database Source NA