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Peptide record

TPDB50470

Antifungal standard
88 amino acids
Basic Information
3D PDB MODEL
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TPDB50470
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 88-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
MSRSLRKGPFVDHHLLKKVRDMNALEKKTPIKTWSRRSMITPEMIGHTFEVHNGRKFLTVFVSETMVGHKLGEFSPTRMFKSHPVKKG
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C458H739N135O119S6
CQY
K
10233.10
11.30
24
7
30
+12
2.11
-0.582
64.09
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
5500
0.54
16
Residue Composition
number
1
A
7
R
2
N
2
D
0
C
5
E
0
Q
6
G
6
H
3
I
6
L
11
K
6
M
6
F
5
P
7
S
7
T
1
W
0
Y
7
V
Amino Acid Distribution
A: 1 R: 7 N: 2 D: 2 C: 0 E: 5 Q: 0 G: 6 H: 6 I: 3 L: 6 K: 11 M: 6 F: 6 P: 5 S: 7 T: 7 W: 1 Y: 0 V: 7
Chemical Descriptors
88 reviewed residue count
C458H739N135O119S6 sequence-only estimate (linear, free termini)
10233.10 sequence-only estimate (linear, free termini)
11.30 sequence-only estimate (linear, free termini)
+12 sequence-only estimate (linear, free termini)
2.11 sequence-only estimate (linear, free termini)
-0.582 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA