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Peptide record

TPDB50465

Antifungal standard
100 amino acids
Basic Information
3D PDB MODEL
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TPDB50465
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 100-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
MSQERLLKVLKAPHISEKATNNAEKSNTIVFKVALDANKVEITNAVEQLFEVKVDSVRTVVVKGKTKRRGAKIGRRSDWKKAYVTLQEGQSLDFVEGAAE
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C491H819N143O149S1
C
KV
11141.83
10.24
20
13
40
+6
2.11
-0.452
90.60
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
6990
0.63
22
Residue Composition
number
10
A
6
R
5
N
4
D
0
C
9
E
4
Q
5
G
1
H
4
I
7
L
13
K
1
M
3
F
1
P
6
S
6
T
1
W
1
Y
13
V
Amino Acid Distribution
A: 10 R: 6 N: 5 D: 4 C: 0 E: 9 Q: 4 G: 5 H: 1 I: 4 L: 7 K: 13 M: 1 F: 3 P: 1 S: 6 T: 6 W: 1 Y: 1 V: 13
Chemical Descriptors
100 reviewed residue count
C491H819N143O149S1 sequence-only estimate (linear, free termini)
11141.83 sequence-only estimate (linear, free termini)
10.24 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
2.11 sequence-only estimate (linear, free termini)
-0.452 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA