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Peptide record

TPDB50460

Antifungal standard
88 amino acids
Basic Information
3D PDB MODEL
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TPDB50460
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 88-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
MSKNLFMDLSSISEKEKGSVEFQIFRLTNRVVKLTYHFKKHGKDYSSQRGLWKILGKRKRLLAYLFKTNFVSYENLIIQLGIRGLKKN
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C479H772N132O124S2
CP
K
10428.33
10.79
21
6
36
+13
1.86
-0.435
94.09
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
11460
1.10
23
Residue Composition
number
1
A
6
R
5
N
2
D
0
C
4
E
3
Q
6
G
2
H
6
I
12
L
13
K
2
M
6
F
0
P
8
S
3
T
1
W
4
Y
4
V
Amino Acid Distribution
A: 1 R: 6 N: 5 D: 2 C: 0 E: 4 Q: 3 G: 6 H: 2 I: 6 L: 12 K: 13 M: 2 F: 6 P: 0 S: 8 T: 3 W: 1 Y: 4 V: 4
Chemical Descriptors
88 reviewed residue count
C479H772N132O124S2 sequence-only estimate (linear, free termini)
10428.33 sequence-only estimate (linear, free termini)
10.79 sequence-only estimate (linear, free termini)
+13 sequence-only estimate (linear, free termini)
1.86 sequence-only estimate (linear, free termini)
-0.435 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA