TPDB

3D PDB MODEL

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TPDB ID TPDB50429

Activity

Antifungal

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 92-aa standard natural antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MQMPRRFNTYCPHCNEHQEHEVEKVRSGRQTGMKWIDRQRERNSGIGNDGKFSKVPGGDKPTKKTDLKYRCGECGKAHLREGWRAGRLEFQE

FASTA

>TPDB50429|Antifungal|length=92
MQMPRRFNTYCPHCNEHQEHEVEKVRSGRQTGMKWIDRQRERNSGIGNDGKFSKVPGGDKPTKKTDLKYRCGECGKAHLREGWRAGRLEFQE

Formula C458H725N153O137S7

Absent Amino Acids

Common Amino Acids RG

Mass 10791.16

PI 9.87

Basic Residues 24

Acidic Residues 13

Hydrophobic Residues 20

Net Charge +7

Boman Index 39.15

Hydrophobicity -1.458

Aliphatic Index 32.83

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 14230

Absorbance 280nm 131.87

Polar Residues 22

number

2

A

11

R

4

N

4

D

4

C

9

E

5

Q

11

G

4

H

2

I

3

L

9

K

3

M

3

F

4

P

3

S

4

T

2

W

2

Y

3

V

Amino Acid Distribution

A: 2 R: 11 N: 4 D: 4 C: 4 E: 9 Q: 5 G: 11 H: 4 I: 2 L: 3 K: 9 M: 3 F: 3 P: 4 S: 3 T: 4 W: 2 Y: 2 V: 3

Length

92

Formula

C458H725N153O137S7

Mass

10791.16

PI

9.87

Net Charge

+7

Boman Index

39.15

Hydrophobicity

-1.458

Evidence 1 Activity

Source & Reference

Database Source NA