TPDB

3D PDB MODEL

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TPDB ID TPDB50407

Activity

Antifungal

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 64-aa standard natural antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MPKMKNNKGAAKRFKKTAGGIKYKHATKRHILTKRTTKNKRQLRPNAILPKCELAAVARMLPYA

FASTA

>TPDB50407|Antifungal|length=64
MPKMKNNKGAAKRFKKTAGGIKYKHATKRHILTKRTTKNKRQLRPNAILPKCELAAVARMLPYA

Formula C323H556N104O79S4

Absent Amino Acids DSW

Common Amino Acids K

Mass 7288.86

PI 11.92

Basic Residues 21

Acidic Residues 1

Hydrophobic Residues 24

Net Charge +18

Boman Index 17.33

Hydrophobicity -0.858

Aliphatic Index 67.34

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 2980

Absorbance 280nm 40.88

Polar Residues 13

number

9

A

6

R

4

N

0

D

1

C

1

E

1

Q

3

G

2

H

3

I

5

L

13

K

3

M

1

F

4

P

0

S

5

T

0

W

2

Y

1

V

Amino Acid Distribution

A: 9 R: 6 N: 4 D: 0 C: 1 E: 1 Q: 1 G: 3 H: 2 I: 3 L: 5 K: 13 M: 3 F: 1 P: 4 S: 0 T: 5 W: 0 Y: 2 V: 1

Length

64

Formula

C323H556N104O79S4

Mass

7288.86

PI

11.92

Net Charge

+18

Boman Index

17.33

Hydrophobicity

-0.858

Evidence 1 Activity

Source & Reference

Database Source NA