TPDB

3D PDB MODEL

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TPDB ID TPDB50406

Activity

Antifungal

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 65-aa standard natural antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MPKLKTSKAIAKRFKVSSSGKILRHKASKSHLLQKKSSKHRRHLSSTCQVDSRDAKNISINLPYL

FASTA

>TPDB50406|Antifungal|length=65
MPKLKTSKAIAKRFKVSSSGKILRHKASKSHLLQKKSSKHRRHLSSTCQVDSRDAKNISINLPYL

Formula C322H554N104O89S2

Absent Amino Acids EW

Common Amino Acids KS

Mass 7370.70

PI 11.67

Basic Residues 21

Acidic Residues 2

Hydrophobic Residues 20

Net Charge +15

Boman Index 18.74

Hydrophobicity -0.794

Aliphatic Index 81.08

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 1490

Absorbance 280nm 20.22

Polar Residues 20

number

4

A

5

R

2

N

2

D

1

C

0

E

2

Q

1

G

4

H

4

I

7

L

12

K

1

M

1

F

2

P

12

S

2

T

0

W

1

Y

2

V

Amino Acid Distribution

A: 4 R: 5 N: 2 D: 2 C: 1 E: 0 Q: 2 G: 1 H: 4 I: 4 L: 7 K: 12 M: 1 F: 1 P: 2 S: 12 T: 2 W: 0 Y: 1 V: 2

Length

65

Formula

C322H554N104O89S2

Mass

7370.70

PI

11.67

Net Charge

+15

Boman Index

18.74

Hydrophobicity

-0.794

Evidence 1 Activity

Source & Reference

Database Source NA