TPDB

3D PDB MODEL

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TPDB ID TPDB50397

Activity

Antifungal

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 85-aa standard natural antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MPGKYGVRYGASLRRDVRKIEVQQHSRYQCPFCGRLTVKRTAAGIWKCSGKGCSKTLAGGAWTVTTAAATSARSTIRRLREMVEV

FASTA

>TPDB50397|Antifungal|length=85
MPGKYGVRYGASLRRDVRKIEVQQHSRYQCPFCGRLTVKRTAAGIWKCSGKGCSKTLAGGAWTVTTAAATSARSTIRRLREMVEV

Formula C404H669N131O114S6

Absent Amino Acids N

Common Amino Acids R

Mass 9377.93

PI 11.09

Basic Residues 18

Acidic Residues 4

Hydrophobic Residues 31

Net Charge +13

Boman Index 14.45

Hydrophobicity -0.384

Aliphatic Index 66.59

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 15720

Absorbance 280nm 167.63

Polar Residues 24

number

9

A

11

R

0

N

1

D

4

C

3

E

3

Q

9

G

1

H

3

I

4

L

6

K

2

M

1

F

2

P

6

S

8

T

2

W

3

Y

7

V

Amino Acid Distribution

A: 9 R: 11 N: 0 D: 1 C: 4 E: 3 Q: 3 G: 9 H: 1 I: 3 L: 4 K: 6 M: 2 F: 1 P: 2 S: 6 T: 8 W: 2 Y: 3 V: 7

Length

85

Formula

C404H669N131O114S6

Mass

9377.93

PI

11.09

Net Charge

+13

Boman Index

14.45

Hydrophobicity

-0.384

Evidence 1 Activity

Source & Reference

Database Source NA