TPDB

3D PDB MODEL

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TPDB ID TPDB50395

Activity

Antifungal

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 71-aa standard natural antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MPAVKVKENEPFDVALRRFKRSCEKAGVLAEVRSREFYEKPTAERKRKAAAAVKRHAKKVQREQRRAVRLY

FASTA

>TPDB50395|Antifungal|length=71
MPAVKVKENEPFDVALRRFKRSCEKAGVLAEVRSREFYEKPTAERKRKAAAAVKRHAKKVQREQRRAVRLY

Formula C367H616N122O98S2

Absent Amino Acids IW

Common Amino Acids R

Mass 8369.81

PI 11.22

Basic Residues 23

Acidic Residues 9

Hydrophobic Residues 28

Net Charge +13

Boman Index 32.58

Hydrophobicity -0.996

Aliphatic Index 64.65

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 2980

Absorbance 280nm 35.60

Polar Residues 9

number

11

A

12

R

1

N

1

D

1

C

8

E

2

Q

1

G

1

H

0

I

3

L

10

K

1

M

3

F

3

P

2

S

1

T

0

W

2

Y

8

V

Amino Acid Distribution

A: 11 R: 12 N: 1 D: 1 C: 1 E: 8 Q: 2 G: 1 H: 1 I: 0 L: 3 K: 10 M: 1 F: 3 P: 3 S: 2 T: 1 W: 0 Y: 2 V: 8

Length

71

Formula

C367H616N122O98S2

Mass

8369.81

PI

11.22

Net Charge

+13

Boman Index

32.58

Hydrophobicity

-0.996

Evidence 1 Activity

Source & Reference

Database Source NA