Back to search

Peptide record

TPDB50360

Antifungal standard
59 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB50360
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 59-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
MKVKSAAKKRFKLTKSGQIKRKHAYTSHLAPHKTTKQKRHLRKQGTVSASDFKRIGNLI
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C300H513N99O77S1
CEW
K
6771.05
12.30
22
1
18
+17
2.79
-1.042
64.58
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
1490
0.22
15
Residue Composition
number
5
A
5
R
1
N
1
D
0
C
0
E
3
Q
3
G
4
H
3
I
4
L
13
K
1
M
2
F
1
P
5
S
5
T
0
W
1
Y
2
V
Amino Acid Distribution
A: 5 R: 5 N: 1 D: 1 C: 0 E: 0 Q: 3 G: 3 H: 4 I: 3 L: 4 K: 13 M: 1 F: 2 P: 1 S: 5 T: 5 W: 0 Y: 1 V: 2
Chemical Descriptors
59 reviewed residue count
C300H513N99O77S1 sequence-only estimate (linear, free termini)
6771.05 sequence-only estimate (linear, free termini)
12.30 sequence-only estimate (linear, free termini)
+17 sequence-only estimate (linear, free termini)
2.79 sequence-only estimate (linear, free termini)
-1.042 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA