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Peptide record

TPDB50353

Antifungal standard
48 amino acids
Basic Information
3D PDB MODEL
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TPDB50353
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 48-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
MKRTYQPSKLKRAKTHGFLARMATASGRKVLKLRRKKQRAQLTVSSER
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C242H427N85O63S2
NDCIW
RK
5599.70
12.64
17
1
16
+15
3.43
-1.065
63.12
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
1490
0.27
12
Residue Composition
number
5
A
8
R
0
N
0
D
0
C
1
E
3
Q
2
G
1
H
0
I
5
L
8
K
2
M
1
F
1
P
4
S
4
T
0
W
1
Y
2
V
Amino Acid Distribution
A: 5 R: 8 N: 0 D: 0 C: 0 E: 1 Q: 3 G: 2 H: 1 I: 0 L: 5 K: 8 M: 2 F: 1 P: 1 S: 4 T: 4 W: 0 Y: 1 V: 2
Chemical Descriptors
48 reviewed residue count
C242H427N85O63S2 sequence-only estimate (linear, free termini)
5599.70 sequence-only estimate (linear, free termini)
12.64 sequence-only estimate (linear, free termini)
+15 sequence-only estimate (linear, free termini)
3.43 sequence-only estimate (linear, free termini)
-1.065 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA