TPDB

3D PDB MODEL

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TPDB ID TPDB50258

Activity

Antifungal

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 87-aa standard natural antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MEVLMMEERIYTIPLRDVINKSVRTKRAPRAIKKIKQFLKRHMKAEIVKIDNELNEKIWERGIQKPPARVRVKAVKEGNVVIATLAE

FASTA

>TPDB50258|Antifungal|length=87
MEVLMMEERIYTIPLRDVINKSVRTKRAPRAIKKIKQFLKRHMKAEIVKIDNELNEKIWERGIQKPPARVRVKAVKEGNVVIATLAE

Formula C455H779N135O121S4

Absent Amino Acids C

Common Amino Acids K

Mass 10205.26

PI 10.80

Basic Residues 22

Acidic Residues 11

Hydrophobic Residues 38

Net Charge +10

Boman Index 34.68

Hydrophobicity -0.431

Aliphatic Index 105.29

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 6990

Absorbance 280nm 68.49

Polar Residues 11

number

7

A

9

R

4

N

2

D

0

C

9

E

2

Q

2

G

1

H

10

I

5

L

12

K

4

M

1

F

4

P

1

S

3

T

1

W

1

Y

9

V

Amino Acid Distribution

A: 7 R: 9 N: 4 D: 2 C: 0 E: 9 Q: 2 G: 2 H: 1 I: 10 L: 5 K: 12 M: 4 F: 1 P: 4 S: 1 T: 3 W: 1 Y: 1 V: 9

Length

87

Formula

C455H779N135O121S4

Mass

10205.26

PI

10.80

Net Charge

+10

Boman Index

34.68

Hydrophobicity

-0.431

Evidence 1 Activity

Source & Reference

Database Source NA