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Peptide record

TPDB50256

Antifungal standard
99 amino acids
Basic Information
3D PDB MODEL
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TPDB50256
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 99-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
MEKRNIRDHKRRLLATKYELRRKLYKAFCNDPALPSDMRDKHRYKLSKLPRNSSFARVRNRCISTGRPRSVYEFFRISRIVFRGLASRGPLMGIKKSSW
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C525H862N172O134S5
Q
R
11887.99
11.91
30
7
35
+21
3.38
-0.879
68.99
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
11585
0.97
22
Residue Composition
number
5
A
18
R
4
N
4
D
2
C
3
E
0
Q
4
G
2
H
5
I
9
L
10
K
3
M
5
F
5
P
10
S
2
T
1
W
4
Y
3
V
Amino Acid Distribution
A: 5 R: 18 N: 4 D: 4 C: 2 E: 3 Q: 0 G: 4 H: 2 I: 5 L: 9 K: 10 M: 3 F: 5 P: 5 S: 10 T: 2 W: 1 Y: 4 V: 3
Chemical Descriptors
99 reviewed residue count
C525H862N172O134S5 sequence-only estimate (linear, free termini)
11887.99 sequence-only estimate (linear, free termini)
11.91 sequence-only estimate (linear, free termini)
+21 sequence-only estimate (linear, free termini)
3.38 sequence-only estimate (linear, free termini)
-0.879 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA