TPDB

3D PDB MODEL

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TPDB ID TPDB50255

Activity

Antifungal

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 81-aa standard natural antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MERIYVIPLRKAKNVPRTIRAPKAVKIVREFLMKHMKADTVKLDESINEKLWERGIQKIPPRIKVKAVKDEDGVVEATLEE

FASTA

>TPDB50255|Antifungal|length=81
MERIYVIPLRKAKNVPRTIRAPKAVKIVREFLMKHMKADTVKLDESINEKLWERGIQKIPPRIKVKAVKDEDGVVEATLEE

Formula C423H716N120O116S3

Absent Amino Acids C

Common Amino Acids K

Mass 9435.25

PI 10.28

Basic Residues 20

Acidic Residues 13

Hydrophobic Residues 34

Net Charge +6

Boman Index 35.57

Hydrophobicity -0.485

Aliphatic Index 102.22

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 6990

Absorbance 280nm 74.08

Polar Residues 8

number

6

A

7

R

2

N

4

D

0

C

9

E

1

Q

2

G

1

H

8

I

5

L

12

K

3

M

1

F

5

P

1

S

3

T

1

W

1

Y

9

V

Amino Acid Distribution

A: 6 R: 7 N: 2 D: 4 C: 0 E: 9 Q: 1 G: 2 H: 1 I: 8 L: 5 K: 12 M: 3 F: 1 P: 5 S: 1 T: 3 W: 1 Y: 1 V: 9

Length

81

Formula

C423H716N120O116S3

Mass

9435.25

PI

10.28

Net Charge

+6

Boman Index

35.57

Hydrophobicity

-0.485

Evidence 1 Activity

Source & Reference

Database Source NA