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Peptide record

TPDB50250

Antifungal standard
93 amino acids
Basic Information
3D PDB MODEL
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TPDB50250
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 93-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
MDGIKYAVFTEKSLRLLGKNQYTFNVESGFTKTEIKHWVELFFGVKVVAVNSHRLPGKGRRMGPILGHTMHYRRMIITLQPGYSIPLLDRETN
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C488H772N136O129S4
C
GL
10736.57
10.44
18
7
38
+7
1.53
-0.274
86.88
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
11460
1.07
21
Residue Composition
number
2
A
7
R
4
N
2
D
0
C
5
E
2
Q
9
G
4
H
6
I
9
L
7
K
4
M
5
F
4
P
4
S
7
T
1
W
4
Y
7
V
Amino Acid Distribution
A: 2 R: 7 N: 4 D: 2 C: 0 E: 5 Q: 2 G: 9 H: 4 I: 6 L: 9 K: 7 M: 4 F: 5 P: 4 S: 4 T: 7 W: 1 Y: 4 V: 7
Chemical Descriptors
93 reviewed residue count
C488H772N136O129S4 sequence-only estimate (linear, free termini)
10736.57 sequence-only estimate (linear, free termini)
10.44 sequence-only estimate (linear, free termini)
+7 sequence-only estimate (linear, free termini)
1.53 sequence-only estimate (linear, free termini)
-0.274 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA