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Peptide record

TPDB50246

Antifungal standard
93 amino acids
Basic Information
3D PDB MODEL
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TPDB50246
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 93-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
MDGIKYAVFTDKSIRLLGKNQYTFNVESGSTRTEIKHWVELFFGVMVIAMNSHRLPGKVKRMGPILGHTMHYRRMIITLQPGYSIPPLRKKRT
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C488H785N139O125S6
C
RGIK
10791.82
11.02
20
5
38
+11
1.61
-0.292
83.76
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
11460
1.06
21
Residue Composition
number
2
A
8
R
3
N
2
D
0
C
3
E
2
Q
8
G
4
H
8
I
7
L
8
K
6
M
4
F
5
P
5
S
7
T
1
W
4
Y
6
V
Amino Acid Distribution
A: 2 R: 8 N: 3 D: 2 C: 0 E: 3 Q: 2 G: 8 H: 4 I: 8 L: 7 K: 8 M: 6 F: 4 P: 5 S: 5 T: 7 W: 1 Y: 4 V: 6
Chemical Descriptors
93 reviewed residue count
C488H785N139O125S6 sequence-only estimate (linear, free termini)
10791.82 sequence-only estimate (linear, free termini)
11.02 sequence-only estimate (linear, free termini)
+11 sequence-only estimate (linear, free termini)
1.61 sequence-only estimate (linear, free termini)
-0.292 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA