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Peptide record

TPDB50226

Antifungal standard
98 amino acids
Basic Information
3D PDB MODEL
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TPDB50226
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 98-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
MASKASGGSTRNGRDSISKRLGVKRYDGQFVKAGNIIVRQRGTRIYPGKNVGMGSDYTLFALKDGYVYFETRRKKKFVSVLSPEEWEKVMAQKNGKVH
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C488H787N147O139S3
C
GK
11033.70
10.76
22
8
35
+13
2.36
-0.721
63.57
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
12950
1.17
24
Residue Composition
number
5
A
9
R
4
N
4
D
0
C
4
E
3
Q
12
G
1
H
4
I
4
L
12
K
3
M
4
F
2
P
8
S
4
T
1
W
5
Y
9
V
Amino Acid Distribution
A: 5 R: 9 N: 4 D: 4 C: 0 E: 4 Q: 3 G: 12 H: 1 I: 4 L: 4 K: 12 M: 3 F: 4 P: 2 S: 8 T: 4 W: 1 Y: 5 V: 9
Chemical Descriptors
98 reviewed residue count
C488H787N147O139S3 sequence-only estimate (linear, free termini)
11033.70 sequence-only estimate (linear, free termini)
10.76 sequence-only estimate (linear, free termini)
+13 sequence-only estimate (linear, free termini)
2.36 sequence-only estimate (linear, free termini)
-0.721 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA