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Peptide record

TPDB50217

Antifungal standard
100 amino acids
Basic Information
3D PDB MODEL
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TPDB50217
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 100-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
MARKSLIQREKKRRNLEQKYHLIRRSSKQEIRKVTSLSDKWEIHGKLQSPPRNSAPARLHRRCFLTGRPRANIRDFGLSGHILREMVHTCLLPGATRSSW
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C512H853N175O137S4
R
11780.74
12.08
29
7
31
+17
3.21
-0.915
77.10
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
12615
1.07
24
Residue Composition
number
5
A
16
R
3
N
2
D
2
C
5
E
4
Q
5
G
5
H
6
I
11
L
8
K
2
M
2
F
5
P
10
S
4
T
2
W
1
Y
2
V
Amino Acid Distribution
A: 5 R: 16 N: 3 D: 2 C: 2 E: 5 Q: 4 G: 5 H: 5 I: 6 L: 11 K: 8 M: 2 F: 2 P: 5 S: 10 T: 4 W: 2 Y: 1 V: 2
Chemical Descriptors
100 reviewed residue count
C512H853N175O137S4 sequence-only estimate (linear, free termini)
11780.74 sequence-only estimate (linear, free termini)
12.08 sequence-only estimate (linear, free termini)
+17 sequence-only estimate (linear, free termini)
3.21 sequence-only estimate (linear, free termini)
-0.915 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA