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Peptide record

TPDB50158

Antifungal standard
88 amino acids
Basic Information
3D PDB MODEL
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TPDB50158
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 88-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
MAHKKGQGSTQNNRDSAGRRLGVKKFGSEFVRAGNIIVRQRGTKMHPGNNVGMGKDHTLYALIDGVVKFEHKDRNRKKVSVVSQNFGE
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C420H689N141O123S3
CW
G
9778.14
11.27
22
7
27
+11
2.72
-0.884
60.80
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
1490
0.15
20
Residue Composition
number
4
A
8
R
7
N
4
D
0
C
3
E
4
Q
12
G
4
H
3
I
3
L
10
K
3
M
4
F
1
P
5
S
3
T
0
W
1
Y
9
V
Amino Acid Distribution
A: 4 R: 8 N: 7 D: 4 C: 0 E: 3 Q: 4 G: 12 H: 4 I: 3 L: 3 K: 10 M: 3 F: 4 P: 1 S: 5 T: 3 W: 0 Y: 1 V: 9
Chemical Descriptors
88 reviewed residue count
C420H689N141O123S3 sequence-only estimate (linear, free termini)
9778.14 sequence-only estimate (linear, free termini)
11.27 sequence-only estimate (linear, free termini)
+11 sequence-only estimate (linear, free termini)
2.72 sequence-only estimate (linear, free termini)
-0.884 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA