TPDB

3D PDB MODEL

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TPDB ID TPDB50150

Activity

Antifungal

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 71-aa standard natural antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

MAEDEGYPAEVIEIIGRTGTTGDVTQVKVRILEGRDKGRVIRRNVRGPVRVGDILILRETEREAREIKSRR

FASTA

>TPDB50150|Antifungal|length=71
MAEDEGYPAEVIEIIGRTGTTGDVTQVKVRILEGRDKGRVIRRNVRGPVRVGDILILRETEREAREIKSRR

Formula C344H595N115O107S1

Absent Amino Acids CHFW

Common Amino Acids R

Mass 8086.28

PI 10.41

Basic Residues 16

Acidic Residues 13

Hydrophobic Residues 24

Net Charge +3

Boman Index 34.13

Hydrophobicity -0.654

Aliphatic Index 97.32

Half Life

Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour

Extinction Coefficient Cystines 1490

Absorbance 280nm 18.43

Polar Residues 9

number

3

A

13

R

1

N

4

D

0

C

9

E

1

Q

8

G

0

H

8

I

3

L

3

K

1

M

0

F

2

P

1

S

5

T

0

W

1

Y

8

V

Amino Acid Distribution

A: 3 R: 13 N: 1 D: 4 C: 0 E: 9 Q: 1 G: 8 H: 0 I: 8 L: 3 K: 3 M: 1 F: 0 P: 2 S: 1 T: 5 W: 0 Y: 1 V: 8

Length

71

Formula

C344H595N115O107S1

Mass

8086.28

PI

10.41

Net Charge

+3

Boman Index

34.13

Hydrophobicity

-0.654

Evidence 1 Activity

Source & Reference

Database Source NA