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Peptide record

TPDB50144

Antifungal standard
56 amino acids
Basic Information
3D PDB MODEL
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TPDB50144
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 56-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
MAAKGAREKIRLVSTAETGHFYTTDKNKRNMPEKMEIKKFDPVVRKHVIYKEAKIK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C292H485N85O80S3
CQW
K
6562.77
10.52
17
7
21
+8
2.57
-0.895
64.46
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
2980
0.45
9
Residue Composition
number
5
A
4
R
2
N
2
D
0
C
5
E
0
Q
2
G
2
H
4
I
1
L
11
K
3
M
2
F
2
P
1
S
4
T
0
W
2
Y
4
V
Amino Acid Distribution
A: 5 R: 4 N: 2 D: 2 C: 0 E: 5 Q: 0 G: 2 H: 2 I: 4 L: 1 K: 11 M: 3 F: 2 P: 2 S: 1 T: 4 W: 0 Y: 2 V: 4
Chemical Descriptors
56 reviewed residue count
C292H485N85O80S3 sequence-only estimate (linear, free termini)
6562.77 sequence-only estimate (linear, free termini)
10.52 sequence-only estimate (linear, free termini)
+8 sequence-only estimate (linear, free termini)
2.57 sequence-only estimate (linear, free termini)
-0.895 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA