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Peptide record

TPDB50131

Antifungal standard
55 amino acids
Basic Information
3D PDB MODEL
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TPDB50131
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 55-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
LKYTGTCTRANNQCKYKGQNNRDTFVKCPTFANKKCTRDGAPCSFDSYSRAVTCD
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C259H408N80O84S6
EHIMW
T
6178.93
9.15
10
4
13
+6
2.93
-0.958
24.91
Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min
4845
0.78
26
Residue Composition
number
4
A
4
R
5
N
4
D
6
C
0
E
2
Q
3
G
0
H
0
I
1
L
6
K
0
M
3
F
2
P
3
S
7
T
0
W
3
Y
2
V
Amino Acid Distribution
A: 4 R: 4 N: 5 D: 4 C: 6 E: 0 Q: 2 G: 3 H: 0 I: 0 L: 1 K: 6 M: 0 F: 3 P: 2 S: 3 T: 7 W: 0 Y: 3 V: 2
Chemical Descriptors
55 reviewed residue count
C259H408N80O84S6 sequence-only estimate (linear, free termini)
6178.93 sequence-only estimate (linear, free termini)
9.15 sequence-only estimate (linear, free termini)
+6 sequence-only estimate (linear, free termini)
2.93 sequence-only estimate (linear, free termini)
-0.958 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA