TPDB

3D PDB MODEL

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TPDB ID TPDB50104

Activity

Antifungal

Activity_category_statistics

Anti-infective peptides

Database_Source

Peptipedia

Sequence_Type

standard

Has_Modification No

Description A 72-aa standard natural antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.

Sequence

IIEPSLKALASKFNCDKMICRKCYVRCPRRTPQRTCRVLTWIPQARLPPRATNCRKRKCGHTNHVRPKKKLK

FASTA

>TPDB50104|Antifungal|length=72
IIEPSLKALASKFNCDKMICRKCYVRCPRRTPQRTCRVLTWIPQARLPPRATNCRKRKCGHTNHVRPKKKLK

Formula C368H629N125O90S8

Absent Amino Acids

Common Amino Acids R

Mass 8501.31

PI 11.44

Basic Residues 23

Acidic Residues 2

Hydrophobic Residues 20

Net Charge +19

Boman Index 20.18

Hydrophobicity -0.824

Aliphatic Index 66.39

Half Life

Mammalian: 20 hour Yeast: 30 min E.coli: >10 hour

Extinction Coefficient Cystines 7365

Absorbance 280nm 86.63

Polar Residues 20

number

4

A

11

R

3

N

1

D

7

C

1

E

2

Q

1

G

2

H

4

I

5

L

10

K

1

M

1

F

7

P

2

S

5

T

1

W

1

Y

3

V

Amino Acid Distribution

A: 4 R: 11 N: 3 D: 1 C: 7 E: 1 Q: 2 G: 1 H: 2 I: 4 L: 5 K: 10 M: 1 F: 1 P: 7 S: 2 T: 5 W: 1 Y: 1 V: 3

Length

72

Formula

C368H629N125O90S8

Mass

8501.31

PI

11.44

Net Charge

+19

Boman Index

20.18

Hydrophobicity

-0.824

Evidence 1 Activity

Source & Reference

Database Source NA