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Peptide record

TPDB50085

Antifungal standard
87 amino acids
Basic Information
3D PDB MODEL
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TPDB50085
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 87-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
GKGTPSFGKRHNKSHTLCNRCGRRSFHVQKKTCSSCGYPSAKTRSHNWAAKAKRRHTTGTGRMRYLKHVSRRFKNGFQTGSAKATSA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C413H670N150O115S5
DEI
RK
9737.10
12.20
28
0
19
+22
3.30
-1.213
23.68
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
8730
0.90
31
Residue Composition
number
7
A
11
R
4
N
0
D
4
C
0
E
2
Q
9
G
6
H
0
I
2
L
11
K
1
M
4
F
2
P
10
S
9
T
1
W
2
Y
2
V
Amino Acid Distribution
A: 7 R: 11 N: 4 D: 0 C: 4 E: 0 Q: 2 G: 9 H: 6 I: 0 L: 2 K: 11 M: 1 F: 4 P: 2 S: 10 T: 9 W: 1 Y: 2 V: 2
Chemical Descriptors
87 reviewed residue count
C413H670N150O115S5 sequence-only estimate (linear, free termini)
9737.10 sequence-only estimate (linear, free termini)
12.20 sequence-only estimate (linear, free termini)
+22 sequence-only estimate (linear, free termini)
3.30 sequence-only estimate (linear, free termini)
-1.213 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA