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Peptide record

TPDB50080

Antifungal standard
78 amino acids
Basic Information
3D PDB MODEL
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TPDB50080
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 78-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
GGKKKKKKTYATPKVLKRKLRKVKLAVLKYYKFDENGKIKRVLRECPAETCGAGVFMAQHANRQYCGKCHSTLVKKSK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C398H672N120O101S5
W
K
8914.76
10.71
26
4
26
+20
2.20
-0.838
65.00
Mammalian: 30 hour Yeast: >20 hour E.coli: >10 hour
6210
0.70
18
Residue Composition
number
6
A
5
R
2
N
1
D
4
C
3
E
2
Q
6
G
2
H
1
I
6
L
19
K
1
M
2
F
2
P
2
S
4
T
0
W
4
Y
6
V
Amino Acid Distribution
A: 6 R: 5 N: 2 D: 1 C: 4 E: 3 Q: 2 G: 6 H: 2 I: 1 L: 6 K: 19 M: 1 F: 2 P: 2 S: 2 T: 4 W: 0 Y: 4 V: 6
Chemical Descriptors
78 reviewed residue count
C398H672N120O101S5 sequence-only estimate (linear, free termini)
8914.76 sequence-only estimate (linear, free termini)
10.71 sequence-only estimate (linear, free termini)
+20 sequence-only estimate (linear, free termini)
2.20 sequence-only estimate (linear, free termini)
-0.838 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA