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Peptide record

TPDB50053

Antifungal standard
56 amino acids
Basic Information
3D PDB MODEL
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TPDB50053
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 56-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
AVQQRRSSKHRRDKRRSHDALTLQTLSVCKKCGKKKLSHRVCSCGMYGELRVKKAH
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C271H472N100O75S5
NIFPW
K
6491.65
11.23
21
3
14
+14
3.54
-1.080
60.89
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
1740
0.27
16
Residue Composition
number
3
A
8
R
0
N
2
D
4
C
1
E
3
Q
3
G
4
H
0
I
5
L
9
K
1
M
0
F
0
P
6
S
2
T
0
W
1
Y
4
V
Amino Acid Distribution
A: 3 R: 8 N: 0 D: 2 C: 4 E: 1 Q: 3 G: 3 H: 4 I: 0 L: 5 K: 9 M: 1 F: 0 P: 0 S: 6 T: 2 W: 0 Y: 1 V: 4
Chemical Descriptors
56 reviewed residue count
C271H472N100O75S5 sequence-only estimate (linear, free termini)
6491.65 sequence-only estimate (linear, free termini)
11.23 sequence-only estimate (linear, free termini)
+14 sequence-only estimate (linear, free termini)
3.54 sequence-only estimate (linear, free termini)
-1.080 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA