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Peptide record

TPDB50052

Antifungal standard
56 amino acids
Basic Information
3D PDB MODEL
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TPDB50052
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 56-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
AVQQRRSSKHRRDKRRSHDALTAQALSVCQKCGKKKLFHRVCSCGMYGDLRVKKAY
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C274H464N98O75S5
NEIPW
RK
6491.61
10.97
19
3
17
+13
3.35
-0.966
57.50
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
3230
0.50
16
Residue Composition
number
5
A
8
R
0
N
3
D
4
C
0
E
4
Q
3
G
3
H
0
I
4
L
8
K
1
M
1
F
0
P
5
S
1
T
0
W
2
Y
4
V
Amino Acid Distribution
A: 5 R: 8 N: 0 D: 3 C: 4 E: 0 Q: 4 G: 3 H: 3 I: 0 L: 4 K: 8 M: 1 F: 1 P: 0 S: 5 T: 1 W: 0 Y: 2 V: 4
Chemical Descriptors
56 reviewed residue count
C274H464N98O75S5 sequence-only estimate (linear, free termini)
6491.61 sequence-only estimate (linear, free termini)
10.97 sequence-only estimate (linear, free termini)
+13 sequence-only estimate (linear, free termini)
3.35 sequence-only estimate (linear, free termini)
-0.966 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA