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Peptide record

TPDB50051

Antifungal standard
56 amino acids
Basic Information
3D PDB MODEL
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TPDB50051
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 56-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
AVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHITADGYYRGRKVIAK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C269H452N94O80S1
CFW
R
6315.19
11.45
17
4
17
+9
3.24
-1.025
64.46
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
2980
0.47
15
Residue Composition
number
5
A
7
R
1
N
3
D
0
C
1
E
2
Q
4
G
4
H
2
I
3
L
6
K
1
M
0
F
1
P
5
S
5
T
0
W
2
Y
4
V
Amino Acid Distribution
A: 5 R: 7 N: 1 D: 3 C: 0 E: 1 Q: 2 G: 4 H: 4 I: 2 L: 3 K: 6 M: 1 F: 0 P: 1 S: 5 T: 5 W: 0 Y: 2 V: 4
Chemical Descriptors
56 reviewed residue count
C269H452N94O80S1 sequence-only estimate (linear, free termini)
6315.19 sequence-only estimate (linear, free termini)
11.45 sequence-only estimate (linear, free termini)
+9 sequence-only estimate (linear, free termini)
3.24 sequence-only estimate (linear, free termini)
-1.025 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA