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Peptide record

TPDB50047

Antifungal standard
58 amino acids
Basic Information
3D PDB MODEL
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TPDB50047
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 58-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
AVPKKRTSMSKKRIRKNLWKKKTYFSIVQSYSLAKSRSFSRGNEHPKPKGFSGQQANK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C300H492N94O80S1
DC
K
6727.85
11.99
18
1
16
+16
3.03
-1.283
42.07
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
8480
1.26
19
Residue Composition
number
3
A
5
R
3
N
0
D
0
C
1
E
3
Q
3
G
1
H
2
I
2
L
12
K
1
M
3
F
3
P
9
S
2
T
1
W
2
Y
2
V
Amino Acid Distribution
A: 3 R: 5 N: 3 D: 0 C: 0 E: 1 Q: 3 G: 3 H: 1 I: 2 L: 2 K: 12 M: 1 F: 3 P: 3 S: 9 T: 2 W: 1 Y: 2 V: 2
Chemical Descriptors
58 reviewed residue count
C300H492N94O80S1 sequence-only estimate (linear, free termini)
6727.85 sequence-only estimate (linear, free termini)
11.99 sequence-only estimate (linear, free termini)
+16 sequence-only estimate (linear, free termini)
3.03 sequence-only estimate (linear, free termini)
-1.283 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA