Back to search

Peptide record

TPDB50045

Antifungal standard
68 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB50045
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 68-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
AVPKKRTSKSKTRIRKAIWKNKANKSALRAFSLAKSILTNRSKSFYYTINDKLLNSSKSISTSKLDES
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C341H578N102O100
CQGHM
KS
7706.96
11.43
18
3
23
+15
2.71
-0.799
76.18
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
8480
1.10
25
Residue Composition
number
6
A
5
R
5
N
2
D
0
C
1
E
0
Q
0
G
0
H
5
I
6
L
13
K
0
M
2
F
1
P
13
S
5
T
1
W
2
Y
1
V
Amino Acid Distribution
A: 6 R: 5 N: 5 D: 2 C: 0 E: 1 Q: 0 G: 0 H: 0 I: 5 L: 6 K: 13 M: 0 F: 2 P: 1 S: 13 T: 5 W: 1 Y: 2 V: 1
Chemical Descriptors
68 reviewed residue count
C341H578N102O100 sequence-only estimate (linear, free termini)
7706.96 sequence-only estimate (linear, free termini)
11.43 sequence-only estimate (linear, free termini)
+15 sequence-only estimate (linear, free termini)
2.71 sequence-only estimate (linear, free termini)
-0.799 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA