Back to search

Peptide record

TPDB50044

Antifungal standard
52 amino acids
Basic Information
3D PDB MODEL
Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber.
TPDB50044
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 52-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
AVPKKRTSKSKKKSRRSHWINKAKTRIRNFLNLAKSISNKKATSFAYSTIKN
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C267H455N87O71
DCEQGM
K
6020.09
12.61
18
0
16
+17
3.19
-1.127
60.19
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
6990
1.16
18
Residue Composition
number
5
A
5
R
5
N
0
D
0
C
0
E
0
Q
0
G
1
H
4
I
2
L
12
K
0
M
2
F
1
P
8
S
4
T
1
W
1
Y
1
V
Amino Acid Distribution
A: 5 R: 5 N: 5 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 1 I: 4 L: 2 K: 12 M: 0 F: 2 P: 1 S: 8 T: 4 W: 1 Y: 1 V: 1
Chemical Descriptors
52 reviewed residue count
C267H455N87O71 sequence-only estimate (linear, free termini)
6020.09 sequence-only estimate (linear, free termini)
12.61 sequence-only estimate (linear, free termini)
+17 sequence-only estimate (linear, free termini)
3.19 sequence-only estimate (linear, free termini)
-1.127 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA