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Peptide record

TPDB50041

Antifungal standard
57 amino acids
Basic Information
3D PDB MODEL
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TPDB50041
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 57-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
AVPKKRKSKMKTRLRKAQWKSEASREAAKALSKAKTVIKSLLAANSANLESNSENSN
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C267H467N87O83S1
DCGHFY
K
6256.24
11.37
15
4
20
+11
2.84
-0.968
68.77
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
5500
0.88
17
Residue Composition
number
10
A
4
R
5
N
0
D
0
C
4
E
1
Q
0
G
0
H
1
I
5
L
11
K
1
M
0
F
1
P
9
S
2
T
1
W
0
Y
2
V
Amino Acid Distribution
A: 10 R: 4 N: 5 D: 0 C: 0 E: 4 Q: 1 G: 0 H: 0 I: 1 L: 5 K: 11 M: 1 F: 0 P: 1 S: 9 T: 2 W: 1 Y: 0 V: 2
Chemical Descriptors
57 reviewed residue count
C267H467N87O83S1 sequence-only estimate (linear, free termini)
6256.24 sequence-only estimate (linear, free termini)
11.37 sequence-only estimate (linear, free termini)
+11 sequence-only estimate (linear, free termini)
2.84 sequence-only estimate (linear, free termini)
-0.968 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA