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Peptide record

TPDB50038

Antifungal standard
49 amino acids
Basic Information
3D PDB MODEL
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TPDB50038
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 49-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
AVPKKKMSHSKSNSRKSNWKRKVIKKINFAVTLGKSLSFGKLSKFYLDD
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C256H423N73O67S1
CEQ
K
5627.68
11.19
15
2
17
+12
2.20
-0.765
69.59
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
6990
1.24
13
Residue Composition
number
2
A
2
R
3
N
2
D
0
C
0
E
0
Q
2
G
1
H
2
I
4
L
12
K
1
M
3
F
1
P
8
S
1
T
1
W
1
Y
3
V
Amino Acid Distribution
A: 2 R: 2 N: 3 D: 2 C: 0 E: 0 Q: 0 G: 2 H: 1 I: 2 L: 4 K: 12 M: 1 F: 3 P: 1 S: 8 T: 1 W: 1 Y: 1 V: 3
Chemical Descriptors
49 reviewed residue count
C256H423N73O67S1 sequence-only estimate (linear, free termini)
5627.68 sequence-only estimate (linear, free termini)
11.19 sequence-only estimate (linear, free termini)
+12 sequence-only estimate (linear, free termini)
2.20 sequence-only estimate (linear, free termini)
-0.765 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA