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Peptide record

TPDB50015

Antifungal standard
78 amino acids
Basic Information
3D PDB MODEL
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TPDB50015
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 78-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
AKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDTGKVIRLRKECPNAECGAGTFMANHKDRHYCGKCGLTYVYQKGE
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C405H670N120O105S5
SW
K
9060.82
10.46
27
6
24
+18
2.45
-1.083
55.00
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
7700
0.85
18
Residue Composition
number
5
A
4
R
2
N
3
D
4
C
3
E
2
Q
6
G
3
H
2
I
4
L
20
K
1
M
2
F
2
P
0
S
5
T
0
W
5
Y
5
V
Amino Acid Distribution
A: 5 R: 4 N: 2 D: 3 C: 4 E: 3 Q: 2 G: 6 H: 3 I: 2 L: 4 K: 20 M: 1 F: 2 P: 2 S: 0 T: 5 W: 0 Y: 5 V: 5
Chemical Descriptors
78 reviewed residue count
C405H670N120O105S5 sequence-only estimate (linear, free termini)
9060.82 sequence-only estimate (linear, free termini)
10.46 sequence-only estimate (linear, free termini)
+18 sequence-only estimate (linear, free termini)
2.45 sequence-only estimate (linear, free termini)
-1.083 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA