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Peptide record

TPDB50013

Antifungal standard
79 amino acids
Basic Information
3D PDB MODEL
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TPDB50013
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 79-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
AKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDATGKVTRLRKECPNTECGAGVFMANHFDRHYCGKCGLTYVYNQKA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C411H668N122O106S5
SW
K
9174.88
10.46
26
5
26
+17
2.33
-0.961
54.30
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
7700
0.84
20
Residue Composition
number
6
A
4
R
3
N
3
D
4
C
2
E
2
Q
5
G
4
H
1
I
4
L
18
K
1
M
3
F
2
P
0
S
6
T
0
W
5
Y
6
V
Amino Acid Distribution
A: 6 R: 4 N: 3 D: 3 C: 4 E: 2 Q: 2 G: 5 H: 4 I: 1 L: 4 K: 18 M: 1 F: 3 P: 2 S: 0 T: 6 W: 0 Y: 5 V: 6
Chemical Descriptors
79 reviewed residue count
C411H668N122O106S5 sequence-only estimate (linear, free termini)
9174.88 sequence-only estimate (linear, free termini)
10.46 sequence-only estimate (linear, free termini)
+17 sequence-only estimate (linear, free termini)
2.33 sequence-only estimate (linear, free termini)
-0.961 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA