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Peptide record

TPDB50008

Antifungal standard
80 amino acids
Basic Information
3D PDB MODEL
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TPDB50008
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 80-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
AKKRKKKNYSTPKKIKHKRKKVKLAVLKYYKVDENGKIHRLRRECPGENCGAGVFMAAHEDRHYCGKCNLTFVFSKPEEK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C417H682N128O109S5
QW
K
9393.10
10.43
28
8
24
+16
2.82
-1.156
53.62
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
6210
0.66
16
Residue Composition
number
5
A
6
R
4
N
2
D
4
C
6
E
0
Q
5
G
4
H
2
I
4
L
18
K
1
M
3
F
3
P
2
S
2
T
0
W
4
Y
5
V
Amino Acid Distribution
A: 5 R: 6 N: 4 D: 2 C: 4 E: 6 Q: 0 G: 5 H: 4 I: 2 L: 4 K: 18 M: 1 F: 3 P: 3 S: 2 T: 2 W: 0 Y: 4 V: 5
Chemical Descriptors
80 reviewed residue count
C417H682N128O109S5 sequence-only estimate (linear, free termini)
9393.10 sequence-only estimate (linear, free termini)
10.43 sequence-only estimate (linear, free termini)
+16 sequence-only estimate (linear, free termini)
2.82 sequence-only estimate (linear, free termini)
-1.156 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA