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Peptide record

TPDB50003

Antifungal standard
12 amino acids
Basic Information
3D PDB MODEL
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TPDB50003
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 12-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
AKRHHGYFRKFH
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C74H106N26O14
NDCEQILMPSTWV
H
1583.82
11.51
7
0
4
+4
3.86
-1.725
8.33
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
1490
0.94
1
Residue Composition
number
1
A
2
R
0
N
0
D
0
C
0
E
0
Q
1
G
3
H
0
I
0
L
2
K
0
M
2
F
0
P
0
S
0
T
0
W
1
Y
0
V
Amino Acid Distribution
A: 1 R: 2 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 1 H: 3 I: 0 L: 0 K: 2 M: 0 F: 2 P: 0 S: 0 T: 0 W: 0 Y: 1 V: 0
Chemical Descriptors
12 reviewed residue count
C74H106N26O14 sequence-only estimate (linear, free termini)
1583.82 sequence-only estimate (linear, free termini)
11.51 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
3.86 sequence-only estimate (linear, free termini)
-1.725 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA