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Peptide record

TPDB49998

Antifungal standard
100 amino acids
Basic Information
3D PDB MODEL
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TPDB49998
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 100-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
AKQSMKARDVKRVKLAEKFYAKRVELKKIISDVNASDEDRWDAVLKLQTLPRDSSPSRQRNRCRQTGRPHGVLRKFGLSRIKVREAAMRGEIPGLKKASW
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C503H849N165O140S3
R
11544.48
11.44
28
11
35
+16
3.15
-0.898
76.10
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
12490
1.08
18
Residue Composition
number
9
A
14
R
2
N
6
D
1
C
5
E
4
Q
5
G
1
H
4
I
8
L
13
K
2
M
2
F
4
P
8
S
2
T
2
W
1
Y
7
V
Amino Acid Distribution
A: 9 R: 14 N: 2 D: 6 C: 1 E: 5 Q: 4 G: 5 H: 1 I: 4 L: 8 K: 13 M: 2 F: 2 P: 4 S: 8 T: 2 W: 2 Y: 1 V: 7
Chemical Descriptors
100 reviewed residue count
C503H849N165O140S3 sequence-only estimate (linear, free termini)
11544.48 sequence-only estimate (linear, free termini)
11.44 sequence-only estimate (linear, free termini)
+16 sequence-only estimate (linear, free termini)
3.15 sequence-only estimate (linear, free termini)
-0.898 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA