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Peptide record

TPDB49997

Antifungal standard
65 amino acids
Basic Information
3D PDB MODEL
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TPDB49997
Antifungal
Anti-infective peptides
Peptipedia
standard
No
A 65-aa standard-residue antifungal peptide sequence curated from Peptipedia, with an available 3D structural model.
Sequence
AKGKDVRVTVILECTSCVRNSVDKVSRGISRYITQKNRHNTPNRLELKKFCPYCYKHTIHGEIKK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C329H547N103O93S4
MW
K
7561.84
10.27
18
5
19
+10
2.68
-0.738
76.31
Mammalian: 4.4 hour Yeast: >20 hour E.coli: >10 hour
4720
0.62
21
Residue Composition
number
1
A
6
R
4
N
2
D
4
C
3
E
1
Q
3
G
3
H
5
I
3
L
9
K
0
M
1
F
2
P
4
S
5
T
0
W
3
Y
6
V
Amino Acid Distribution
A: 1 R: 6 N: 4 D: 2 C: 4 E: 3 Q: 1 G: 3 H: 3 I: 5 L: 3 K: 9 M: 0 F: 1 P: 2 S: 4 T: 5 W: 0 Y: 3 V: 6
Chemical Descriptors
65 reviewed residue count
C329H547N103O93S4 sequence-only estimate (linear, free termini)
7561.84 sequence-only estimate (linear, free termini)
10.27 sequence-only estimate (linear, free termini)
+10 sequence-only estimate (linear, free termini)
2.68 sequence-only estimate (linear, free termini)
-0.738 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

NA