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Peptide record

TPDB49963

Antifungal standard
6 amino acids
Basic Information
3D PDB MODEL
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TPDB49963
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 6-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
KLSFRA
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C33H56N10O8
NDCEQGHIMPTWYV
ARLKFS
720.87
11.49
2
0
3
+2
2.36
-0.133
81.67
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
0
0.00
1
Residue Composition
number
1
A
1
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
0
I
1
L
1
K
0
M
1
F
0
P
1
S
0
T
0
W
0
Y
0
V
Amino Acid Distribution
A: 1 R: 1 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 0 L: 1 K: 1 M: 0 F: 1 P: 0 S: 1 T: 0 W: 0 Y: 0 V: 0
Chemical Descriptors
6 reviewed residue count
C33H56N10O8 sequence-only estimate (linear, free termini)
720.87 sequence-only estimate (linear, free termini)
11.49 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
2.36 sequence-only estimate (linear, free termini)
-0.133 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.