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Peptide record

TPDB49961

Antifungal standard
15 amino acids
Basic Information
3D PDB MODEL
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TPDB49961
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 15-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
SSMKLSFRARGYGFR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C78H123N25O20S1
NDCEQHIPTWV
RS
1763.05
12.12
4
0
6
+4
2.92
-0.587
32.67
Mammalian: 1.9 hour Yeast: >20 hour E.coli: >10 hour
1490
0.85
4
Residue Composition
number
1
A
3
R
0
N
0
D
0
C
0
E
0
Q
2
G
0
H
0
I
1
L
1
K
1
M
2
F
0
P
3
S
0
T
0
W
1
Y
0
V
Amino Acid Distribution
A: 1 R: 3 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 2 H: 0 I: 0 L: 1 K: 1 M: 1 F: 2 P: 0 S: 3 T: 0 W: 0 Y: 1 V: 0
Chemical Descriptors
15 reviewed residue count
C78H123N25O20S1 sequence-only estimate (linear, free termini)
1763.05 sequence-only estimate (linear, free termini)
12.12 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
2.92 sequence-only estimate (linear, free termini)
-0.587 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.