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Peptide record

TPDB49953

Antifungal standard
11 amino acids
Basic Information
3D PDB MODEL
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TPDB49953
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 11-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
WRGITKVVKKV
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C62H108N18O13
ANDCEQHLMFPSY
KV
1313.65
11.73
4
0
5
+4
1.26
-0.100
114.55
Mammalian: 2.8 hour Yeast: 3 min E.coli: 2 min
5500
4.19
1
Residue Composition
number
0
A
1
R
0
N
0
D
0
C
0
E
0
Q
1
G
0
H
1
I
0
L
3
K
0
M
0
F
0
P
0
S
1
T
1
W
0
Y
3
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 1 H: 0 I: 1 L: 0 K: 3 M: 0 F: 0 P: 0 S: 0 T: 1 W: 1 Y: 0 V: 3
Chemical Descriptors
11 reviewed residue count
C62H108N18O13 sequence-only estimate (linear, free termini)
1313.65 sequence-only estimate (linear, free termini)
11.73 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
1.26 sequence-only estimate (linear, free termini)
-0.100 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.