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Peptide record

TPDB49952

Antifungal standard
11 amino acids
Basic Information
3D PDB MODEL
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TPDB49952
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 11-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
WFGKLYRGITK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C67H101N17O14
ANDCEQHMPSV
GK
1368.64
10.72
3
0
5
+3
1.06
-0.445
70.91
Mammalian: 2.8 hour Yeast: 3 min E.coli: 2 min
6990
5.11
2
Residue Composition
number
0
A
1
R
0
N
0
D
0
C
0
E
0
Q
2
G
0
H
1
I
1
L
2
K
0
M
1
F
0
P
0
S
1
T
1
W
1
Y
0
V
Amino Acid Distribution
A: 0 R: 1 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 2 H: 0 I: 1 L: 1 K: 2 M: 0 F: 1 P: 0 S: 0 T: 1 W: 1 Y: 1 V: 0
Chemical Descriptors
11 reviewed residue count
C67H101N17O14 sequence-only estimate (linear, free termini)
1368.64 sequence-only estimate (linear, free termini)
10.72 sequence-only estimate (linear, free termini)
+3 sequence-only estimate (linear, free termini)
1.06 sequence-only estimate (linear, free termini)
-0.445 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.