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Peptide record

TPDB49943

Antifungal standard
8 amino acids
Basic Information
3D PDB MODEL
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TPDB49943
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 8-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
LKIAKKVK
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C44H86N12O9
RNDCEQGHMFPSTWY
K
927.24
11.00
4
0
4
+4
0.81
-0.162
146.25
Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min
0
0.00
0
Residue Composition
number
1
A
0
R
0
N
0
D
0
C
0
E
0
Q
0
G
0
H
1
I
1
L
4
K
0
M
0
F
0
P
0
S
0
T
0
W
0
Y
1
V
Amino Acid Distribution
A: 1 R: 0 N: 0 D: 0 C: 0 E: 0 Q: 0 G: 0 H: 0 I: 1 L: 1 K: 4 M: 0 F: 0 P: 0 S: 0 T: 0 W: 0 Y: 0 V: 1
Chemical Descriptors
8 reviewed residue count
C44H86N12O9 sequence-only estimate (linear, free termini)
927.24 sequence-only estimate (linear, free termini)
11.00 sequence-only estimate (linear, free termini)
+4 sequence-only estimate (linear, free termini)
0.81 sequence-only estimate (linear, free termini)
-0.162 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.