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Peptide record

TPDB49936

Antifungal standard
33 amino acids
Basic Information
3D PDB MODEL
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TPDB49936
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 33-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
KGCNYYSADGTFICEGESDPNNPKACTLECDPR
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C149H225N41O55S4
QHMWV
C
3598.91
4.06
3
6
7
-3
2.44
-0.930
29.70
Mammalian: 1.3 hour Yeast: 3 min E.coli: 2 min
3230
0.90
13
Residue Composition
number
2
A
1
R
3
N
3
D
4
C
3
E
0
Q
3
G
0
H
1
I
1
L
2
K
0
M
1
F
3
P
2
S
2
T
0
W
2
Y
0
V
Amino Acid Distribution
A: 2 R: 1 N: 3 D: 3 C: 4 E: 3 Q: 0 G: 3 H: 0 I: 1 L: 1 K: 2 M: 0 F: 1 P: 3 S: 2 T: 2 W: 0 Y: 2 V: 0
Chemical Descriptors
33 reviewed residue count
C149H225N41O55S4 sequence-only estimate (linear, free termini)
3598.91 sequence-only estimate (linear, free termini)
4.06 sequence-only estimate (linear, free termini)
-3 sequence-only estimate (linear, free termini)
2.44 sequence-only estimate (linear, free termini)
-0.930 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.