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Peptide record

TPDB49930

Antifungal standard
30 amino acids
Basic Information
3D PDB MODEL
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TPDB49930
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 30-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
DLRKILQTGMFICKYLGRLSGSKVAVAYKM
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C153H257N41O39S3
NEHPW
LK
3391.15
10.41
6
1
15
+5
0.77
0.253
104.00
Mammalian: 1.1 hour Yeast: 3 min E.coli: >10 hour
2980
0.88
7
Residue Composition
number
2
A
2
R
0
N
1
D
1
C
0
E
1
Q
3
G
0
H
2
I
4
L
4
K
2
M
1
F
0
P
2
S
1
T
0
W
2
Y
2
V
Amino Acid Distribution
A: 2 R: 2 N: 0 D: 1 C: 1 E: 0 Q: 1 G: 3 H: 0 I: 2 L: 4 K: 4 M: 2 F: 1 P: 0 S: 2 T: 1 W: 0 Y: 2 V: 2
Chemical Descriptors
30 reviewed residue count
C153H257N41O39S3 sequence-only estimate (linear, free termini)
3391.15 sequence-only estimate (linear, free termini)
10.41 sequence-only estimate (linear, free termini)
+5 sequence-only estimate (linear, free termini)
0.77 sequence-only estimate (linear, free termini)
0.253 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.