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Peptide record

TPDB49928

Antifungal standard
24 amino acids
Basic Information
3D PDB MODEL
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TPDB49928
Antifungal
Anti-infective peptides
dbAMP
standard
No
A 24-aa standard-residue antifungal peptide sequence curated from dbAMP, with an available 3D structural model.
Sequence
LAEDLARYYSALRHYINLITRQRY
Physicochemical Analysis

Sequence-only estimates for a linear peptide with free termini, not experimentally measured molecular properties. Mass and formula exclude cyclization and disulfide formation. The optical estimates assume paired cysteines, 280 nm, 1 g/L and a 1 cm path. The N-end rule estimate is not a measured plasma half-life.

C136H212N40O37
CGKMFPWV
RLY
2999.43
9.81
5
2
13
+2
2.65
-0.513
110.00
Mammalian: 5.5 hour Yeast: 3 min E.coli: 2 min
5960
1.99
8
Residue Composition
number
3
A
4
R
1
N
1
D
0
C
1
E
1
Q
0
G
1
H
2
I
4
L
0
K
0
M
0
F
0
P
1
S
1
T
0
W
4
Y
0
V
Amino Acid Distribution
A: 3 R: 4 N: 1 D: 1 C: 0 E: 1 Q: 1 G: 0 H: 1 I: 2 L: 4 K: 0 M: 0 F: 0 P: 0 S: 1 T: 1 W: 0 Y: 4 V: 0
Chemical Descriptors
24 reviewed residue count
C136H212N40O37 sequence-only estimate (linear, free termini)
2999.43 sequence-only estimate (linear, free termini)
9.81 sequence-only estimate (linear, free termini)
+2 sequence-only estimate (linear, free termini)
2.65 sequence-only estimate (linear, free termini)
-0.513 sequence-only estimate (linear, free termini)
Evidence Records 1 records
Evidence 1 Activity

Source & Reference

dbAMP

Other

Source Activity Label Source Definition
Antifungal
dbAMP classified under the Anti-fungal function class.